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betI DNA-binding transcriptional repressor BetI [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944981, updated on 17-Dec-2024
Official Symbol
betI
Official Full Name
DNA-binding transcriptional repressor BetI
Primary source
ECOCYC:EG10111
Locus tag
b0313
See related
ASAP:ABE-0001076
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0311
Summary
TetR family. [More information is available at EcoGene: EG10111].
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Sequence:
NC_000913.3 (328747..329334, complement)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene choline dehydrogenase Neighboring gene betaine aldehyde dehydrogenase Neighboring gene choline:H(+) symporter Neighboring gene protein YahV

Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Structure and function of negative feedback loops at the interface of genetic and metabolic networks. Krishna S, et al. Nucleic Acids Res, 2006. PMID 16684993, Free PMC Article
  2. The complex bet promoters of Escherichia coli: regulation by oxygen (ArcA), choline (BetI), and osmotic stress. Lamark T, et al. J Bacteriol, 1996 Mar. PMID 8626294, Free PMC Article
  3. DNA sequence and analysis of the bet genes encoding the osmoregulatory choline-glycine betaine pathway of Escherichia coli. Lamark T, et al. Mol Microbiol, 1991 May. PMID 1956285
  4. DNA-binding properties of the BetI repressor protein of Escherichia coli: the inducer choline stimulates BetI-DNA complex formation. Rkenes TP, et al. J Bacteriol, 1996 Mar. PMID 8626295, Free PMC Article
  5. The binary protein-protein interaction landscape of Escherichia coli. Rajagopala SV, et al. Nat Biotechnol, 2014 Mar. PMID 24561554, Free PMC Article

See all (9) citations in PubMed

GeneRIFs: Gene References Into Functions

Products Interactant Other Gene Complex Source Pubs Description

Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables DNA binding IDA
Inferred from Direct Assay
more info
 PubMed 
enables DNA binding IEA
Inferred from Electronic Annotation
more info
  
enables DNA-binding transcription factor activity IBA
Inferred from Biological aspect of Ancestor
more info
  
enables DNA-binding transcription factor activity IEA
Inferred from Electronic Annotation
more info
  
enables transcription cis-regulatory region binding IBA
Inferred from Biological aspect of Ancestor
more info
  
Process Evidence Code Pubs
involved_in glycine betaine biosynthetic process from choline IEA
Inferred from Electronic Annotation
more info
  
involved_in negative regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
  
acts_upstream_of_or_within negative regulation of DNA-templated transcription IEP
Inferred from Expression Pattern
more info
 PubMed 
involved_in regulation of DNA-templated transcription IBA
Inferred from Biological aspect of Ancestor
more info
  
acts_upstream_of_or_within response to osmotic stress IEP
Inferred from Expression Pattern
more info
 PubMed 
Preferred Names
DNA-binding transcriptional repressor BetI

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    328747..329334 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414847.3 DNA-binding transcriptional repressor BetI [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414847.3

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6N0IHR2, A0A8S7EIB1
    Conserved Domains (1) summary
    PRK00767
    Location:1 → 194
    PRK00767; transcriptional regulator BetI; Validated
Nucleotide Protein
Heading Accession and Version

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