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yafP [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944912, updated on 24-Aug-2024

Summary

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Official Symbol
yafP
Primary source
ASAP:ABE-0000801
Locus tag
b0234
See related
ECOCYC:G6118
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0235
Summary
LexA regulon. dinB-yafNOP operon. [More information is available at EcoGene: EG13153]. Polar dinB mutations affecting the dinB-yafN-yafO-yafP operon reduce spontaneous mutagenesis . [More information is available at EcoCyc: G6118].
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Genomic context

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Sequence:
NC_000913.3 (252709..253161)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene antitoxin YafN Neighboring gene ribosome-dependent mRNA interferase toxin YafO Neighboring gene pseudo Neighboring gene pseudo Neighboring gene peptidase D

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Escherichia coli YafP protein modulates DNA damaging property of the nitroaromatic compounds. Gutierrez A, et al. Nucleic Acids Res, 2011 May. PMID 21300638, Free PMC Article
  2. The dinB operon and spontaneous mutation in Escherichia coli. McKenzie GJ, et al. J Bacteriol, 2003 Jul. PMID 12813093, Free PMC Article
  3. An SOS-regulated type 2 toxin-antitoxin system. Singletary LA, et al. J Bacteriol, 2009 Dec. PMID 19837801, Free PMC Article
  4. A functional update of the Escherichia coli K-12 genome. Serres MH, et al. Genome Biol, 2001. PMID 11574054, Free PMC Article
  5. Highly accurate genome sequences of Escherichia coli K-12 strains MG1655 and W3110. Hayashi K, et al. Mol Syst Biol, 2006. PMID 16738553, Free PMC Article

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Results strongly suggest that YafP protein participates in metabolic transformation of DNA damaging compounds.
    Title: Escherichia coli YafP protein modulates DNA damaging property of the nitroaromatic compounds.
Submit: New GeneRIF Correction

General gene information

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Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables acyltransferase activity IEA
Inferred from Electronic Annotation
more info
  
enables acyltransferase activity, transferring groups other than amino-acyl groups IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
  
involved_in SOS response IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative N-acetyltransferase YafP

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    252709..253161
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414769.1 putative N-acetyltransferase YafP [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414769.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A895P1C8
    Conserved Domains (1) summary
    PRK09831
    Location:4 → 150
    PRK09831; GNAT family N-acetyltransferase
Nucleotide Protein
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