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yaaU putative transporter YaaU [ Escherichia coli str. K-12 substr. MG1655 ]

Gene ID: 944766, updated on 3-Dec-2024

Summary

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Official Symbol
yaaU
Official Full Name
putative transporter YaaU
Primary source
ECOCYC:EG11566
Locus tag
b0045
See related
ASAP:ABE-0000156
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Escherichia coli str. K-12 substr. MG1655 (strain: K-12, substrain: MG1655)
Lineage
Bacteria; Pseudomonadota; Gammaproteobacteria; Enterobacterales; Enterobacteriaceae; Escherichia
Also known as
ECK0046; yabE
Summary
Major Facilitator Superfamily (MFS). [More information is available at EcoGene: EG11566]. The YaaU protein is an uncharacterised member of the major facilitator superfamily (MFS) of transporters . [More information is available at EcoCyc: EG11566].
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Genomic context

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Sequence:
NC_000913.3 (45807..47138)

NC_000913.3Genomic Context describing neighboring genes Neighboring gene putative electron transfer flavoprotein FixB Neighboring gene putative oxidoreductase FixC Neighboring gene putative ferredoxin FixX Neighboring gene regulator of KefC-mediated potassium transport and quinone oxidoreductase Neighboring gene K(+) : H(+) antiporter KefC Neighboring gene dihydrofolate reductase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000913.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Microbial drug efflux proteins of the major facilitator superfamily. Saidijam M, et al. Curr Drug Targets, 2006 Jul. PMID 16842212
  2. Systematic sequencing of the Escherichia coli genome: analysis of the 0-2.4 min region. Yura T, et al. Nucleic Acids Res, 1992 Jul 11. PMID 1630901, Free PMC Article
  3. The major facilitator superfamily. Saier MH Jr, et al. J Mol Microbiol Biotechnol, 1999 Nov. PMID 10943556
  4. Inferring gene function from evolutionary change in signatures of translation efficiency. Krisko A, et al. Genome Biol, 2014 Mar 3. PMID 24580753, Free PMC Article
  5. A major superfamily of transmembrane facilitators that catalyse uniport, symport and antiport. Marger MD, et al. Trends Biochem Sci, 1993 Jan. PMID 8438231

See all (12) citations in PubMed

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by EcoCyc

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
  
Process Evidence Code Pubs
acts_upstream_of_or_within response to oxidative stress IMP
Inferred from Mutant Phenotype
more info
 PubMed 
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
  
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
  
is_active_in plasma membrane IBA
Inferred from Biological aspect of Ancestor
more info
  
located_in plasma membrane IDA
Inferred from Direct Assay
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
  

General protein information

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Preferred Names
putative transporter YaaU

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000913.3 Reference assembly

    Range
    45807..47138
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_414587.1 putative transporter YaaU [Escherichia coli str. K-12 substr. MG1655]

    See identical proteins and their annotated locations for NP_414587.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A376MCL6, A0A775TIW1
    Conserved Domains (1) summary
    cd17316
    Location:20 → 418
    MFS_SV2_like; Metazoan Synaptic vesicle glycoprotein 2 (SV2) and related small molecule transporters of the Major Facilitator Superfamily
Nucleotide Protein
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