U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

POM121L2 POM121 transmembrane nucleoporin like 2 [ Homo sapiens (human) ]

Gene ID: 94026, updated on 5-Aug-2022

Summary

Official Symbol
POM121L2provided by HGNC
Official Full Name
POM121 transmembrane nucleoporin like 2provided by HGNC
Primary source
HGNC:HGNC:13973
See related
Ensembl:ENSG00000158553 AllianceGenome:HGNC:13973
Gene type
protein coding
RefSeq status
VALIDATED
Organism
Homo sapiens
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo
Also known as
POM121L; POM121-L
Summary
Predicted to enable nuclear localization sequence binding activity. Predicted to be a structural constituent of nuclear pore. Predicted to be involved in RNA export from nucleus and protein import into nucleus. Predicted to be part of nuclear pore. [provided by Alliance of Genome Resources, Apr 2022]
Orthologs
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

See POM121L2 in Genome Data Viewer
Location:
6p22.1
Exon count:
1
Annotation release Status Assembly Chr Location
110 current GRCh38.p14 (GCF_000001405.40) 6 NC_000006.12 (27308377..27312273, complement)
110 current T2T-CHM13v2.0 (GCF_009914755.1) 6 NC_060930.1 (27177485..27181380, complement)
105.20220307 previous assembly GRCh37.p13 (GCF_000001405.25) 6 NC_000006.11 (27276156..27280052, complement)

Chromosome 6 - NC_000006.12Genomic Context describing neighboring genes Neighboring gene tRNA-Gln (anticodon CTG) 5-1 Neighboring gene tRNA-Ser (anticodon GCT) 2-1 Neighboring gene uncharacterized LOC105375107 Neighboring gene Sharpr-MPRA regulatory region 151 Neighboring gene vomeronasal 1 receptor 10 pseudogene

Genomic regions, transcripts, and products

Phenotypes

EBI GWAS Catalog

Description
A comprehensive family-based replication study of schizophrenia genes.
EBI GWAS Catalog
Common variants on chromosome 6p22.1 are associated with schizophrenia.
EBI GWAS Catalog

General gene information

Markers

Homology

Gene Ontology Provided by GOA

Function Evidence Code Pubs
enables nuclear localization sequence binding IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
enables structural constituent of nuclear pore IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Process Evidence Code Pubs
involved_in RNA export from nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
involved_in protein import into nucleus IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 
Component Evidence Code Pubs
part_of nuclear pore IBA
Inferred from Biological aspect of Ancestor
more info
PubMed 

General protein information

Preferred Names
POM121-like protein 2
Names
OM121 membrane glycoprotein (rat homolog)-like 2
POM121 membrane glycoprotein (rat homolog)-like 2
POM121 membrane glycoprotein-like 2

NCBI Reference Sequences (RefSeq)

NEW Try the new Transcript table

RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_033482.4NP_258443.2  POM121-like protein 2

    See identical proteins and their annotated locations for NP_258443.2

    Status: VALIDATED

    Source sequence(s)
    AL021808
    Consensus CDS
    CCDS59497.1
    UniProtKB/Swiss-Prot
    C9J1I7, Q96KW2
    Related
    ENSP00000392726.1, ENST00000444565.2
    Conserved Domains (1) summary
    pfam15229
    Location:164365
    POM121; POM121 family

RefSeqs of Annotated Genomes: Homo sapiens Annotation Release 110 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference GRCh38.p14 Primary Assembly

Genomic

  1. NC_000006.12 Reference GRCh38.p14 Primary Assembly

    Range
    27308377..27312273 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Alternate T2T-CHM13v2.0

Genomic

  1. NC_060930.1 Alternate T2T-CHM13v2.0

    Range
    27177485..27181380 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

Suppressed Reference Sequence(s)

The following Reference Sequences have been suppressed. Explain

  1. NG_008890.1: Suppressed sequence

    Description
    NG_008890.1: This RefSeq was permanently suppressed because it is now thought that this gene does encode a protein.