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gabD succinate-semialdehyde dehydrogenase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939976, updated on 6-Oct-2023

Summary

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Gene symbol
gabD
Gene description
succinate-semialdehyde dehydrogenase
Locus tag
BSU_03910
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU03910
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Genomic context

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Sequence:
NC_000964.3 (442950..444338)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene transcriptional regulator (GntR/MocR family) with PLP binding site (GabR-GABA-PLP aldimine) Neighboring gene 4-aminobutyrate aminotransferase Neighboring gene glucose uptake protein Neighboring gene forespore glucose 1-dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Interaction of Bacillus subtilis GabR with the gabTD promoter: role of repeated sequences and effect of GABA in transcriptional activation. Nardella C, et al. FEBS J, 2020 Nov. PMID 32147931
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Interaction of Bacillus subtilis GabR with the gabTD promoter: role of repeated sequences and effect of GABA in transcriptional activation.
    Title: Interaction of Bacillus subtilis GabR with the gabTD promoter: role of repeated sequences and effect of GABA in transcriptional activation.
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Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
succinate-semialdehyde dehydrogenase
NP_388273.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 12354229, 15590624, 9723923, 12123465, 24529384, 24809290, 25911692; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388273.1 succinate-semialdehyde dehydrogenase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388273.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KPL3
    Conserved Domains (1) summary
    cd07103
    Location:7 → 460
    ALDH_F5_SSADH_GabD; Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P94428.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases