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xkdK phage PBSX; conserved hypothetical protein [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939943, updated on 6-Oct-2023

Summary

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Gene symbol
xkdK
Gene description
phage PBSX; conserved hypothetical protein
Locus tag
BSU_12650
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU12650
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Genomic context

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Sequence:
NC_000964.3 (1332402..1333802)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; conserved hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
phage PBSX; conserved hypothetical protein
NP_389147.2
  • Evidence 4: Unknown function but conserved in other organisms; Product type h: extrachromosomal origin

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389147.2 phage PBSX; conserved hypothetical protein [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389147.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1L8R9
    Conserved Domains (3) summary
    pfam04984
    Location:205 → 351
    Phage_sheath_1; Phage tail sheath protein subtilisin-like domain
    pfam17481
    Location:102 → 177
    Phage_sheath_1N; Phage tail sheath protein beta-sandwich domain
    pfam17482
    Location:358 → 465
    Phage_sheath_1C; Phage tail sheath C-terminal domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54331.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases