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ydfR conserved membrane protein of unknown function [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939897, updated on 6-Jun-2024

Summary

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Gene symbol
ydfR
Gene description
conserved membrane protein of unknown function
Locus tag
BSU_05530
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU05530
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Genomic context

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Sequence:
NC_000964.3 (600229..600906, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein, sporulation-related Neighboring gene conserved hypothetical protein, sporulation-related Neighboring gene hypothetical protein Neighboring gene spore coat protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
conserved membrane protein of unknown function
NP_388434.1
  • Evidence 4: Unknown function but conserved in other organisms

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    600229..600906 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388434.1 conserved membrane protein of unknown function [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388434.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A6M3ZB40
    Conserved Domains (1) summary
    COG2323
    Location:29 → 208
    YcaP; Uncharacterized membrane protein YcaP, DUF421 family [Function unknown]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P96696.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials