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ykfD putative cell wall oligopeptide ABC transporter (ATP binding protein) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939863, updated on 1-May-2025
Gene symbol
ykfD
Gene description
putative cell wall oligopeptide ABC transporter (ATP binding protein)
Locus tag
BSU_13000
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU13000
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Sequence:
NC_000964.3 (1368844..1369833)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene muropeptide L,D-carboxypeptidase Neighboring gene L-Ala-D/L-Glu epimerase Neighboring gene gamma-D-glutamyl-L-diaminoacid endopeptidase Neighboring gene 6-phosphogluconolactonase Neighboring gene N(G),N(G)-dimethylarginine dimethylaminohydrolase

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative cell wall oligopeptide ABC transporter (ATP binding protein)
NP_389183.2
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15101989; Product type t: transporter

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389183.2 putative cell wall oligopeptide ABC transporter (ATP binding protein) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389183.2

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    C0SP98
    Conserved Domains (1) summary
    PRK15079
    Location:2 → 316
    PRK15079; oligopeptide ABC transporter ATP-binding protein OppF; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
C0SP98.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases