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yhjO putative permease (recent HGT island) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939780, updated on 6-Oct-2023

Summary

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Gene symbol
yhjO
Gene description
putative permease (recent HGT island)
Locus tag
BSU_10580
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU10580
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Genomic context

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Sequence:
NC_000964.3 (1132179..1133384, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene transcriptional regulator of the ntd operon (NtdR-NTD) (recent HGT island) Neighboring gene putative integral inner membrane protein (recent HGT island) Neighboring gene putative transcription factor Neighboring gene putative metal-chelating cysteine-rich protein of unknown function

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative permease (recent HGT island)
NP_388939.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15849754, 16850406; Product type t: transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    1132179..1133384 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388939.1 putative permease (recent HGT island) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388939.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1JHJ6
    Conserved Domains (1) summary
    cd17329
    Location:16 → 383
    MFS_MdtH_MDR_like; Multidrug resistance protein MdtH and similar multidrug resistance (MDR) transporters of the Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O07569.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases