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xhlB phage PBSX; holin [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939732, updated on 6-Oct-2023
Gene symbol
xhlB
Gene description
phage PBSX; holin
Locus tag
BSU_12800
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU12800
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Sequence:
NC_000964.3 (1347013..1347276)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene phage PBSX; lytic exoenzyme Neighboring gene phage PBSX; putative enzyme Neighboring gene phage PBSX; N-acetylmuramoyl-L-alanine amidase Neighboring gene three component toxin / antitoxin / antitoxin SpoIISABC, antitoxin C

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
phage PBSX; holin
NP_389163.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 2110147, 9555893; Product type h: extrachromosomal origin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389163.1 phage PBSX; holin [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389163.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1L8T2
    Conserved Domains (1) summary
    pfam04688
    Location:3 → 83
    Holin_SPP1; SPP1 phage holin
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
Q99163.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases