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rulR molecular ruler co-factor for RNA; new fold [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939653, updated on 26-Jun-2025
Gene symbol
rulR
Gene description
molecular ruler co-factor for RNA; new fold
Locus tag
BSU_16610
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU16610
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Sequence:
NC_000964.3 (1733410..1733685)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene ribosome maturation factor Neighboring gene transcription translation coupling factor involved in Rho-dependent transcription termination Neighboring gene K-turn RNA binding protein Neighboring gene initiation factor IF-2 Neighboring gene pseudo

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Newly Identified Nucleoid-Associated-Like Protein YlxR Regulates Metabolic Gene Expression in Bacillus subtilis. Ogura M, et al. mSphere, 2018 Oct 24. PMID 30355672, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
molecular ruler co-factor for RNA; new fold
NP_389543.1
  • Evidence 2a: Function from experimental evidences in other organisms; PubMedId: 11679764, 12682299, 26771646, 27435445; Product type f: factor

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389543.1 molecular ruler co-factor for RNA; new fold [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389543.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0C3LAB4, A0ABD3ZQU8
    Conserved Domains (1) summary
    cd00279
    Location:8 → 85
    YlxR; Ylxr homologs; group of conserved hypothetical bacterial proteins of unknown function; structure revealed putative RNA binding cleft; proteins are encoded by an operon that includes other proteins involved in transcription and/or translation
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P32728.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases