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ydjE putative sugar kinase (ribokinase family); prophage region 3 [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939494, updated on 6-Jun-2024

Summary

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Gene symbol
ydjE
Gene description
putative sugar kinase (ribokinase family); prophage region 3
Locus tag
BSU_06170
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU06170
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Genomic context

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Sequence:
NC_000964.3 (670087..671049)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene glucitol (sorbitol) dehydrogenase Neighboring gene H+-glucitol symporter; prophage region 3 Neighboring gene phage shock protein A homolog regulator; prophage region 3 Neighboring gene putative phage replication protein; prophage region 3 Neighboring gene conserved hypothetical protein; prophage region 3

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative sugar kinase (ribokinase family); prophage region 3
NP_388498.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 26483775, 22720735; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388498.1 putative sugar kinase (ribokinase family); prophage region 3 [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388498.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1JE12
    Conserved Domains (1) summary
    cd01167
    Location:6 → 307
    bac_FRK; Fructokinases (FRKs) mainly from bacteria and plants are enzymes with high specificity for fructose, as are all FRKs, but they catalyzes the conversion of fructose to fructose-6-phosphate, which is an entry point into glycolysis via conversion into ...
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34768.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases