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ydjG putative phage replication protein; prophage region 3 [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939489, updated on 17-Dec-2024
Gene symbol
ydjG
Gene description
putative phage replication protein; prophage region 3
Locus tag
BSU_06190
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU06190
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Sequence:
NC_000964.3 (671994..673019)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative sugar kinase (ribokinase family); prophage region 3 Neighboring gene phage shock protein A homolog regulator; prophage region 3 Neighboring gene conserved hypothetical protein; prophage region 3 Neighboring gene hypothetical protein Neighboring gene putative membrane associated potassium channel; prophage region 3

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative phage replication protein; prophage region 3
NP_388500.1
  • Evidence 3: Putative function from multiple computational evidences; Product type h : extrachromosomal origin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388500.1 putative phage replication protein; prophage region 3 [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388500.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAX3RN32
    Conserved Domains (2) summary
    pfam08271
    Location:5 → 46
    TF_Zn_Ribbon; TFIIB zinc-binding
    cl00638
    Location:169 → 250
    RNA_pol_Rpb4; RNA polymerase Rpb4
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34434.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials