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ymaB putative cofactor involved in deoxyribonucleotide synthesis [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939453, updated on 17-Dec-2024

Summary

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Gene symbol
ymaB
Gene description
putative cofactor involved in deoxyribonucleotide synthesis
Locus tag
BSU_17400
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU17400
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Genomic context

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Sequence:
NC_000964.3 (1872128..1872748)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene co-factor of ribonucleotide diphosphate reductase Neighboring gene ribonucleoside-diphosphate reductase (major subunit) Neighboring gene ribonucleoside-diphosphate reductase (minor subunit) Neighboring gene N-acetylmuramoyl-L-alanine amidase (sporulation-specific) Neighboring gene mother cell sporulation ATPase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative cofactor involved in deoxyribonucleotide synthesis
NP_389622.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 16885274, 21561096; Product type f: factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389622.1 putative cofactor involved in deoxyribonucleotide synthesis [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389622.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5D4NEU0
    Conserved Domains (1) summary
    COG4112
    Location:1 → 206
    YmaB; Predicted phosphoesterase, NUDIX family [General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P50619.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases