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xpdC phage PBSX; manganese-containing peroxidase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939414, updated on 6-Oct-2023
Gene symbol
xpdC
Gene description
phage PBSX; manganese-containing peroxidase
Locus tag
BSU_12490
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU12490
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Sequence:
NC_000964.3 (1319690..1320526)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene phage PBSX; conserved hypothetical protein Neighboring gene phage PBSX; gamma-polyglutamate hydrolase Neighboring gene phage PBSX; putative peptidase Neighboring gene phage PBSX transcriptional regulator

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
phage PBSX; manganese-containing peroxidase
NP_389131.2
  • Evidence 1c: Function from experimental evidences in the studied genus; PubMedId: 8760915, 15466572, 22752169, 27362423; Product type h: extrachromosomal origin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389131.2 phage PBSX; manganese-containing peroxidase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389131.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1L1H5
    Conserved Domains (1) summary
    pfam05067
    Location:1 → 278
    Mn_catalase; Manganese containing catalase
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34423.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases