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ykoX putative integral membrane protein [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939381, updated on 10-Oct-2024
Gene symbol
ykoX
Gene description
putative integral membrane protein
Locus tag
BSU_13430
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU13430
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Sequence:
NC_000964.3 (1409912..1410577)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene ATP-dependent DNA ligase subunit Ku; AP/deoxyribose 5'-phosphate (5'-dRP)-lyase Neighboring gene diguanylate cyclase Neighboring gene miscRNA Neighboring gene putative manganese-related ion transporter Neighboring gene RNA polymerase sigma factor (heat stress responsive) Neighboring gene sigmaI modulating factor

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative integral membrane protein
NP_389226.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15849754, 16850406, 23687963; Product type m: membrane component

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389226.1 putative integral membrane protein [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389226.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0C3LIC0, D4FVR7
    Conserved Domains (1) summary
    COG0586
    Location:13 → 209
    DedA; Uncharacterized membrane protein DedA, SNARE-associated domain [Function unknown]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34908.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials