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ykoY putative manganese-related ion transporter [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939368, updated on 17-Dec-2024

Summary

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Gene symbol
ykoY
Gene description
putative manganese-related ion transporter
Locus tag
BSU_13440
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU13440
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Genomic context

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Sequence:
NC_000964.3 (1410654..1411628)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene diguanylate cyclase Neighboring gene putative integral membrane protein Neighboring gene miscRNA Neighboring gene RNA polymerase sigma factor (heat stress responsive) Neighboring gene sigmaI modulating factor Neighboring gene small acid-soluble spore protein (alpha/beta-type SASP)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative manganese-related ion transporter
NP_389227.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15096624, 15849754, 16850406, 25794618, 25794619; Product type t : transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389227.1 putative manganese-related ion transporter [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389227.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAX3RHW1
    Conserved Domains (1) summary
    TIGR03716
    Location:77 → 303
    R_switched_YkoY; integral membrane protein, YkoY family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34997.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases