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ykvU spore membrane protein involved in germination [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939262, updated on 6-Oct-2023

Summary

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Gene symbol
ykvU
Gene description
spore membrane protein involved in germination
Locus tag
BSU_13830
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU13830
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Genomic context

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Sequence:
NC_000964.3 (1449250..1450587)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene conserved hypothetical protein (HGT island) Neighboring gene cell wall hydrolase related to spore cortex-lytic enzymes Neighboring gene spore-specific thiol-disulfide oxidoreductase (SpoVD maturation) Neighboring gene Fe(II) efflux transporter possibly involved in copper(II) uptake

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
spore membrane protein involved in germination
NP_389266.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 15686839, 15849754, 16850406, 19648239; Product type m: membrane component

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389266.1 spore membrane protein involved in germination [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389266.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KU76
    Conserved Domains (1) summary
    cd13124
    Location:9 → 430
    MATE_SpoVB_like; Stage V sporulation protein B, also known as Stage III sporulation protein F, and related proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O31686.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases