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bifM ABC transporter (permease) biofilm formation [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939210, updated on 12-Feb-2021

Summary

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Gene symbol
bifM
Gene description
ABC transporter (permease) biofilm formation
Locus tag
BSU_08320
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU08320
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Genomic context

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Sequence:
NC_000964.3 (906764..907954)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene two-component sensor histidine kinase [LinK] (linearmycin resistance, biofilm formation) Neighboring gene two-component response regulator [LinJ] (linearmycin resistance, biofilm formation) Neighboring gene ABC transporter (ATP-binding protein) biofilm formation Neighboring gene ABC transporter (permease) biofilm formation Neighboring gene transcriptional regulator of phenolic acid decarboxylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ABC transporter (permease) biofilm formation
NP_388713.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 15849754, 16850406, 28461449; Product type t: transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388713.1 ABC transporter (permease) biofilm formation [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388713.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    pfam12698
    Location:19 → 391
    ABC2_membrane_3; ABC-2 family transporter protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P94441.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases