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hdhQ Mn(2+)-dependent (deoxy)ribonucleoside pyrophosphohydrolase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939080, updated on 17-Dec-2024
Gene symbol
hdhQ
Gene description
Mn(2+)-dependent (deoxy)ribonucleoside pyrophosphohydrolase
Locus tag
BSU_21890
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU21890
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Sequence:
NC_000964.3 (2303920..2304537, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene dihydroxy-acid dehydratase Neighboring gene putative lyase or scaffold Neighboring gene bacillithiol peroxidase Neighboring gene homoserine O-acetyltransferase

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Purification, crystallization and preliminary X-ray analysis of a putative nucleotide phosphohydrolase, YpgQ, from Bacillus subtilis. Jeon YJ, et al. Acta Crystallogr F Struct Biol Commun, 2014 Jul. PMID 25005104, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The crystal structure of YpgQ, a putative nucleotide phosphohydrolase, has been determined.
    Title: Purification, crystallization and preliminary X-ray analysis of a putative nucleotide phosphohydrolase, YpgQ, from Bacillus subtilis.
Submit: New GeneRIF Correction

Homology

Preferred Names
Mn(2+)-dependent (deoxy)ribonucleoside pyrophosphohydrolase
NP_390072.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 25005104, 27062940; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2303920..2304537 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390072.1 Mn(2+)-dependent (deoxy)ribonucleoside pyrophosphohydrolase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390072.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAX3RJD6
    Conserved Domains (1) summary
    COG1418
    Location:1 → 200
    RnaY; HD superfamily phosphodieaserase, includes HD domain of RNase Y [Translation, ribosomal structure and biogenesis, General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54168.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases