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exnP 5'3'-exonuclease [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 939070, updated on 6-Oct-2023

Summary

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Gene symbol
exnP
Gene description
5'3'-exonuclease
Locus tag
BSU_22010
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU22010
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Genomic context

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Sequence:
NC_000964.3 (2310995..2311885, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene preQ0 transporter (promiscuous) Neighboring gene putative RNA binding protein (no RNase H activity) Neighboring gene small acid-soluble spore protein Neighboring gene hypothetical protein Neighboring gene spore associated protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA. Redrejo-Rodríguez M, et al. Biochimie, 2016 Sep-Oct. PMID 27343627
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data indicate conserved amino acid residues in the nucleotide incision repair (NIR)-specific enzymes of human APE1 and Bacillus subtilis ExoA..
    Title: Structural comparison of AP endonucleases from the exonuclease III family reveals new amino acid residues in human AP endonuclease 1 that are involved in incision of damaged DNA.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
5'3'-exonuclease
NP_390083.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16045613, 17038322, 17905985, 27435445; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2310995..2311885 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390083.1 5'3'-exonuclease [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390083.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1IPP1
    Conserved Domains (1) summary
    smart00475
    Location:4 → 265
    53EXOc; 5'-3' exonuclease
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54161.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases