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dacB D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*) (required for spore cortex) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938953, updated on 6-Oct-2023

Summary

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Gene symbol
dacB
Gene description
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*) (required for spore cortex)
Locus tag
BSU_23190
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU23190
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Genomic context

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Sequence:
NC_000964.3 (2423383..2424531, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene 23S rRNA pseudouridine 2633 (=2605 standard) pseudouridine synthase Neighboring gene spore maturation protein Neighboring gene spore maturation protein Neighboring gene hypothetical protein Neighboring gene chromosome condensation and segregation factor Neighboring gene chromosome condensation and partitioning factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*) (required for spore cortex)
NP_390200.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 7642500, 8892816, 9864321, 10498740, 18266856, 19542328; Product type cp : cell process

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2423383..2424531 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390200.1 D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 5*) (required for spore cortex) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390200.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1L6P7
    Conserved Domains (1) summary
    COG1686
    Location:1 → 377
    DacC; D-alanyl-D-alanine carboxypeptidase [Cell wall/membrane/envelope biogenesis]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P35150.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials