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gerD lipoprotein factor mediating clustering of germination proteins [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938910, updated on 12-Feb-2021
Gene symbol
gerD
Gene description
lipoprotein factor mediating clustering of germination proteins
Locus tag
BSU_01550
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU01550
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Sequence:
NC_000964.3 (158515..159072, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene N-acetylmuramoyl-L-alanine amidase Neighboring gene phosphorylation-dependent (Y327) transcriptional regulator Neighboring gene inner membrane protein involved in activation of the KinB signaling pathway to sporulation Neighboring gene polysaccharide deacetylase involved in sporulation

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
lipoprotein factor mediating clustering of germination proteins
NP_388036.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 17122337, 10618233, 10376819, 24530795; Product type f: factor

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    158515..159072 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388036.1 lipoprotein factor mediating clustering of germination proteins [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388036.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P16450
    Conserved Domains (1) summary
    pfam17898
    Location:64 → 177
    GerD; Spore germination GerD central core domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P16450.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials