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sigW RNA polymerase ECF(extracytoplasmic function)-type sigma factor W [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938868, updated on 6-Oct-2023
Gene symbol
sigW
Gene description
RNA polymerase ECF(extracytoplasmic function)-type sigma factor W
Locus tag
BSU_01730
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU01730
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Sequence:
NC_000964.3 (194849..195412)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene tRNA-Tyr Neighboring gene tRNA-Gln Neighboring gene anti-sigma(W) factor Neighboring gene diadenylate cyclase Neighboring gene regulator of diadenylate cyclase activity

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Identification of Bacillus subtilis sigma-dependent genes that provide intrinsic resistance to antimicrobial compounds produced by Bacilli. Butcher BG, et al. Mol Microbiol, 2006 May. PMID 16629676
  2. Structural insights into the regulation of Bacillus subtilis SigW activity by anti-sigma RsiW. Devkota SR, et al. PLoS One, 2017. PMID 28319136, Free PMC Article
  3. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  4. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  5. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
RNA polymerase ECF(extracytoplasmic function)-type sigma factor W
NP_388054.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11866510, 15130127, 16629676, 21542858, 28319136, 22720735; Product type r : regulator

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388054.1 RNA polymerase ECF(extracytoplasmic function)-type sigma factor W [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388054.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1JFC8
    Conserved Domains (1) summary
    PRK09641
    Location:1 → 187
    PRK09641; RNA polymerase sigma factor SigW; Provisional
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
5WUQ_A.1
5WUQ_B.1
5WUR_A.1
5WUR_B.1
Q45585.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases