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abhA transcriptional regulator [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938738, updated on 6-Oct-2023

Summary

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Gene symbol
abhA
Gene description
transcriptional regulator
Locus tag
BSU_14480
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU14480
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Genomic context

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Sequence:
NC_000964.3 (1517865..1518143)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene cell-shape determining protein Neighboring gene two-component sensor potassium-responsive histidine kinase regulating cannibalism and biofilm formation Neighboring gene putative gamma-glutamylcyclotransferase (bacillithiol degradation)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The sensitivity of Bacillus subtilis to diverse antimicrobial compounds is influenced by Abh. Murray EJ, et al. Arch Microbiol, 2010 Dec. PMID 20844865
  2. Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation. Chumsakul O, et al. Nucleic Acids Res, 2011 Jan. PMID 20817675, Free PMC Article
  3. SigmaX is involved in controlling Bacillus subtilis biofilm architecture through the AbrB homologue Abh. Murray EJ, et al. J Bacteriol, 2009 Nov. PMID 19767430, Free PMC Article
  4. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  5. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The transition state regulator Abh plays an important role in influencing the sensitivity of B. subtilis to diverse antimicrobial compounds.
    Title: The sensitivity of Bacillus subtilis to diverse antimicrobial compounds is influenced by Abh.
  2. Almost all Abh-binding sites in the genome overlapped with sites for AbrB.
    Title: Genome-wide binding profiles of the Bacillus subtilis transition state regulator AbrB and its homolog Abh reveals their interactive role in transcriptional regulation.
  3. Abh is shown to activate transcription from the promoter of the eps operon through its control of SlrR.
    Title: SigmaX is involved in controlling Bacillus subtilis biofilm architecture through the AbrB homologue Abh.
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General gene information

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Homology

General protein information

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Preferred Names
transcriptional regulator
NP_389331.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16159768, 17720793, 19767430, 20817675, 20844865; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_389331.1 transcriptional regulator [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_389331.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1L240
    Conserved Domains (1) summary
    COG2002
    Location:1 → 87
    AbrB; Bifunctional DNA-binding transcriptional regulator of stationary/sporulation/toxin gene expression and antitoxin component of the YhaV-PrlF toxin-antitoxin module [Transcription, Defense mechanisms]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39758.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials