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bkdR transcriptional regulator [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938666, updated on 6-Oct-2023

Summary

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Gene symbol
bkdR
Gene description
transcriptional regulator
Locus tag
BSU_24100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU24100
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Genomic context

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Sequence:
NC_000964.3 (2504789..2506867, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene branched-chain amino acid dehydrogenase Neighboring gene phosphate BCFA and butyryl coenzyme A transferase Neighboring gene hypothetical protein Neighboring gene 2-methylisocitrate lyase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcriptional regulator
NP_390290.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10094682, 12427936, 15241682, 16585774; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2504789..2506867 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390290.1 transcriptional regulator [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390290.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KZP2
    Conserved Domains (2) summary
    COG3829
    Location:117 → 687
    RocR; Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding Fis domains [Transcription, Signal transduction mechanisms]
    cl26651
    Location:3 → 77
    AcetDehyd-dimer; Prokaryotic acetaldehyde dehydrogenase, dimerization
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54529.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases