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sdpA export step of killing factor SdpC [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938629, updated on 12-Feb-2021

Summary

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Gene symbol
sdpA
Gene description
export step of killing factor SdpC
Locus tag
BSU_33750
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU33750
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Genomic context

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Sequence:
NC_000964.3 (3464289..3464765)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene choline ABC transporter (ATP-binding protein) Neighboring gene putative transcriptional regulator (controlling choline uptake) Neighboring gene export step of killing factor SdpC Neighboring gene precursor of killing factor SdpC Neighboring gene integral membrane immunity regulator of autophagy Neighboring gene transcriptional regulator of SdpC synthesis operon (ArsR family)

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Production of the cannibalism toxin SDP is a multistep process that requires SdpA and SdpB. Pérez Morales TG, et al. J Bacteriol, 2013 Jul. PMID 23687264, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
export step of killing factor SdpC
NP_391255.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16469701, 17069462, 23687264; Product type f: factor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391255.1 export step of killing factor SdpC [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391255.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O34889
    Conserved Domains (1) summary
    TIGR04034
    Location:11 → 157
    export_SdpA; antimicrobial peptide system protein, SdpA family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34889.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases