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epsD putative extracellular matrix glycosyltransferase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938611, updated on 17-Dec-2024
Gene symbol
epsD
Gene description
putative extracellular matrix glycosyltransferase
Locus tag
BSU_34340
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34340
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Sequence:
NC_000964.3 (3525250..3526395, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative glycosyltransferase involved in biofilm formation Neighboring gene biofilm extracellular matrix formation chain-length determining factor Neighboring gene putative glycosyltransferase involved in matrix formation (chain-length determination) Neighboring gene bifunctional flagellar clutch and glycosyltransferase acting during biofilm formation Neighboring gene putative UDP-sugar epimerase involved in biofilm matrix formation Neighboring gene protein tyrosine kinase involved in biofilm matrix formation

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative extracellular matrix glycosyltransferase
NP_391314.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15175311, 15661000, 23378512, 26299781; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3525250..3526395 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391314.1 putative extracellular matrix glycosyltransferase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391314.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KHS7, A0AAX3RUM2
    Conserved Domains (1) summary
    cd03808
    Location:4 → 364
    GT4_CapM-like; capsular polysaccharide biosynthesis glycosyltransferase CapM and similar proteins
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71053.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials