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epsC putative UDP-sugar epimerase involved in biofilm matrix formation [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938571, updated on 17-Dec-2024
Gene symbol
epsC
Gene description
putative UDP-sugar epimerase involved in biofilm matrix formation
Locus tag
BSU_34350
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU34350
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Sequence:
NC_000964.3 (3526407..3528203, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene biofilm extracellular matrix formation chain-length determining factor Neighboring gene putative glycosyltransferase involved in matrix formation (chain-length determination) Neighboring gene bifunctional flagellar clutch and glycosyltransferase acting during biofilm formation Neighboring gene putative extracellular matrix glycosyltransferase Neighboring gene protein tyrosine kinase involved in biofilm matrix formation Neighboring gene modulator of protein tyrosine kinase EpsB involved in biofilm matrix formation

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. In vitro characterization of N-terminal truncated EpsC from Bacillus subtilis 168, a UDP-N-acetylglucosamine 4,6-dehydratase. Kaundinya CR, et al. Arch Biochem Biophys, 2018 Nov 1. PMID 30222950
  2. Tracing the domestication of a biofilm-forming bacterium. McLoon AL, et al. J Bacteriol, 2011 Apr. PMID 21278284, Free PMC Article
  3. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  4. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  5. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative UDP-sugar epimerase involved in biofilm matrix formation
NP_391315.1
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15661000, 23378512, 27655338; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3526407..3528203 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391315.1 putative UDP-sugar epimerase involved in biofilm matrix formation [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391315.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G1R1
    Conserved Domains (1) summary
    COG1086
    Location:1 → 598
    FlaA1; NDP-sugar epimerase, includes UDP-GlcNAc-inverting 4,6-dehydratase FlaA1 and capsular polysaccharide biosynthesis protein EpsC [Cell wall/membrane/envelope biogenesis, Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P71052.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials