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tapA lipoprotein for biofilm formation [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938532, updated on 21-Aug-2021

Summary

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Gene symbol
tapA
Gene description
lipoprotein for biofilm formation
Locus tag
BSU_24640
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU24640
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Genomic context

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Sequence:
NC_000964.3 (2554486..2555247, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene master regulator of biofilm formation Neighboring gene major biofilm matrix component Neighboring gene type I signal peptidase Neighboring gene hypothetical protein Neighboring gene factor involved in sporulation

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. The majority of the matrix protein TapA is dispensable for Bacillus subtilis colony biofilm architecture. Earl C, et al. Mol Microbiol, 2020 Dec. PMID 32491277
  2. An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms. Romero D, et al. Mol Microbiol, 2011 Jun. PMID 21477127, Free PMC Article
  3. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  4. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  5. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. The majority of the matrix protein TapA is dispensable for Bacillus subtilis colony biofilm architecture.
    Title: The majority of the matrix protein TapA is dispensable for Bacillus subtilis colony biofilm architecture.
  2. TapA (YqxM) is essential for the proper anchoring and assembly of theTasA amyloid fibres.
    Title: An accessory protein required for anchoring and assembly of amyloid fibres in B. subtilis biofilms.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
lipoprotein for biofilm formation
NP_390344.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10464223, 10559173, 14707086, 16430695, 17554552, 21477127, 24488317, 26441856, 26819068, 27655338; Product type lp : lipoprotein

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2554486..2555247 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390344.1 lipoprotein for biofilm formation [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390344.1

    Status: PROVISIONAL

    Conserved Domains (1) summary
    TIGR04087
    Location:3 → 193
    YqxM_for_SipW; YqxM protein
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P40949.2

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials