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ybfG putative pepdidoglycan binding protein [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938433, updated on 6-Oct-2023
Gene symbol
ybfG
Gene description
putative pepdidoglycan binding protein
Locus tag
BSU_02200
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU02200
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Sequence:
NC_000964.3 (239644..241842, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene pseudo Neighboring gene pseudo Neighboring gene hypothetical protein Neighboring gene putative permease Neighboring gene putative transcriptional regulator (AraC/XylS family, cupin family) Neighboring gene phosphoribosylglycinamide formyltransferase 2

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative pepdidoglycan binding protein
NP_388102.1
  • Evidence 3: Putative function from multiple computational evidences; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    239644..241842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388102.1 putative pepdidoglycan binding protein [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388102.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1JF63
    Conserved Domains (3) summary
    cd06418
    Location:276 → 493
    GH25_BacA-like; BacA is a bacterial lysin from Enterococcus faecalis that degrades bacterial cell walls by catalyzing the hydrolysis of 1,4-beta-linkages between N-acetylmuramic acid and N-acetyl-D-glucosamine residues. BacA is homologous to the YbfG and YkuG lysins of ...
    COG3409
    Location:93 → 193
    PGRP; Peptidoglycan-binding (PGRP) domain of peptidoglycan hydrolases [Cell wall/membrane/envelope biogenesis]
    pfam01471
    Location:222 → 276
    PG_binding_1; Putative peptidoglycan binding domain
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O31447.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases