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rtpA anti-TRAP regulator [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938403, updated on 12-Feb-2021

Summary

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Gene symbol
rtpA
Gene description
anti-TRAP regulator
Locus tag
BSU_02530
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU02530
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Genomic context

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Sequence:
NC_000964.3 (277160..277321)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative phosphotransferase Neighboring gene miscRNA Neighboring gene putative tryptophan or indole exporter Neighboring gene two-component response regulator [YcbM]

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Mechanism for pH-dependent gene regulation by amino-terminus-mediated homooligomerization of Bacillus subtilis anti-trp RNA-binding attenuation protein. Sachleben JR, et al. Proc Natl Acad Sci U S A, 2010 Aug 31. PMID 20713740, Free PMC Article
  2. Alanine scanning mutagenesis of anti-TRAP (AT) reveals residues involved in binding to TRAP. Chen Y, et al. J Mol Biol, 2008 Apr 11. PMID 18334255, Free PMC Article
  3. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  4. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  5. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Data show that oligomerization of active AT(3) to form inactive AT(12) is linked to protonation of the amino terminus.
    Title: Mechanism for pH-dependent gene regulation by amino-terminus-mediated homooligomerization of Bacillus subtilis anti-trp RNA-binding attenuation protein.
  2. Using alanine-scanning mutagenesis of yczA (anti-TRAP (AT)), four residues are foune essential for binding to mtrB (trp RNA-binding attenuation protein (TRAP)).
    Title: Alanine scanning mutagenesis of anti-TRAP (AT) reveals residues involved in binding to TRAP.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
anti-TRAP regulator
NP_388135.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10706627, 11557884, 12855807, 15099736, 15213402, 15743934, 16306262; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388135.1 anti-TRAP regulator [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388135.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    O31466
    Conserved Domains (1) summary
    cd10748
    Location:2 → 53
    anti-TRAP; anti-TRAP (AT) protein specific to Bacilli
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O31466.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases