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ycbU putative lyase (PLP-dependent) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938393, updated on 12-Feb-2021
Gene symbol
ycbU
Gene description
putative lyase (PLP-dependent)
Locus tag
BSU_02660
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU02660
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Try the new Transcripts and proteins table
Sequence:
NC_000964.3 (287499..288611)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene component of the twin-arginine pre-protein translocation pathway Neighboring gene component of the twin-arginine pre-protein translocation pathway Neighboring gene pyrrolidone-carboxylate (pyroglutamate) peptidase Neighboring gene flavonoid efflux transporter; drug-export protein Neighboring gene transcriptional repressor of lmrAB and yxaGH operons (flavonoid and antibiotic resistance)

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative lyase (PLP-dependent)
NP_388148.2
  • Evidence 3: Putative function from multiple computational evidences; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388148.2 putative lyase (PLP-dependent) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388148.2

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG0520
    Location:5 → 365
    CsdA; Selenocysteine lyase/Cysteine desulfurase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P42253.3

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases