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ycgA putative branched chain amino acid permease [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938359, updated on 6-Oct-2023

Summary

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Gene symbol
ycgA
Gene description
putative branched chain amino acid permease
Locus tag
BSU_03020
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU03020
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Genomic context

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Sequence:
NC_000964.3 (325339..326772)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene L-proline betaine and betonicine ABC transporter (permease) Neighboring gene L-proline betaine and betonicine ABC transporter ABC transporter (glycine betaine-binding lipoprotein) Neighboring gene putative amidohydrolase Neighboring gene putative integral inner membrane protein of unknown function Neighboring gene alpha-amylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
putative branched chain amino acid permease
NP_388184.2
  • Evidence 3: Putative function from multiple computational evidences; PubMedId: 15849754, 16850406, 21747963, 21764931; Product type t: transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388184.2 putative branched chain amino acid permease [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388184.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1L5G3
    Conserved Domains (1) summary
    COG1288
    Location:10 → 472
    YfcC; Uncharacterized membrane protein YfcC, ion transporter superfamily [General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P55908.3

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases