U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

putR transcriptional activator of proline degradation operon [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938337, updated on 12-Feb-2021

Summary

Go to the top of the page Help
Gene symbol
putR
Gene description
transcriptional activator of proline degradation operon
Locus tag
BSU_03230
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU03230
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000964.3 (348724..349959)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene 1-pyrroline-5-carboxylate dehydrogenase Neighboring gene proline permease Neighboring gene hypothetical protein Neighboring gene putative permease

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. PrcR, a PucR-type transcriptional activator, is essential for proline utilization and mediates proline-responsive expression of the proline utilization operon putBCP in Bacillus subtilis. Huang SC, et al. Microbiology (Reading), 2011 Dec. PMID 21964733
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. These results suggest that ycgP (PrcR) is a PucR-type transcriptional activator that mediates expression of the B. subtilis putBCP operon in response to proline availability.
    Title: PrcR, a PucR-type transcriptional activator, is essential for proline utilization and mediates proline-responsive expression of the proline utilization operon putBCP in Bacillus subtilis.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
transcriptional activator of proline degradation operon
NP_388205.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 21840319, 21964733, 22139509; Product type r: regulator

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388205.2 transcriptional activator of proline degradation operon [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388205.2

    Status: PROVISIONAL

    Conserved Domains (1) summary
    COG2508
    Location:1 → 409
    PucR; DNA-binding transcriptional regulator, PucR family [Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P94393.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases
Research Materials