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immR ICEBs1 mobile element: transcriptional regulator (Xre family) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938150, updated on 6-Oct-2023
Gene symbol
immR
Gene description
ICEBs1 mobile element: transcriptional regulator (Xre family)
Locus tag
BSU_04820
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU04820
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Sequence:
NC_000964.3 (531130..531513, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene tRNA-Leu Neighboring gene ICEBs1 mobile element: integrase Neighboring gene ICEBs1 mobile element: site-specific protease cleaving ImmR Neighboring gene ICEBs1 mobile element: excisionase Neighboring gene ICEBs1 mobile element: conserved protein of unknown function Neighboring gene ICEBs1 mobile element: conserved protein of unknown function

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Mobility of the native Bacillus subtilis conjugative plasmid pLS20 is regulated by intercellular signaling. Singh PK, et al. PLoS Genet, 2013 Oct. PMID 24204305, Free PMC Article
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
ICEBs1 mobile element: transcriptional regulator (Xre family)
NP_388363.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 8083175, 17511812, 22505685; Product type h: extrachromosomal origin

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    531130..531513 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_388363.1 ICEBs1 mobile element: transcriptional regulator (Xre family) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_388363.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G5G2
    Conserved Domains (1) summary
    cd00093
    Location:4 → 61
    HTH_XRE; Helix-turn-helix XRE-family like proteins. Prokaryotic DNA binding proteins belonging to the xenobiotic response element family of transcriptional regulators.
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P96631.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases