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fadR transcriptional regulator of fatty acids degradation [FadR-long-chain (C14-C20) acyl-CoAs] [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 938105, updated on 12-Feb-2021

Summary

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Gene symbol
fadR
Gene description
transcriptional regulator of fatty acids degradation [FadR-long-chain (C14-C20) acyl-CoAs]
Locus tag
BSU_28550
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU28550
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Genomic context

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Sequence:
NC_000964.3 (2917957..2918541, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene electron transfer flavoprotein (beta subunit) Neighboring gene enoyl-CoA hydratase Neighboring gene long chain acyl-CoA ligase (degradative) Neighboring gene putative integral inner membrane protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation. Fujihashi M, et al. Proteins, 2014 Jul. PMID 24356978
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Studied and determined the crystal structures of FadR(Bs) proteins prepared with and without stearoyl(C18)-CoA.
    Title: Structural characterization of a ligand-bound form of Bacillus subtilis FadR involved in the regulation of fatty acid degradation.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
transcriptional regulator of fatty acids degradation [FadR-long-chain (C14-C20) acyl-CoAs]
NP_390733.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 17189250, 18941141, 21398533, 24356978; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2917957..2918541 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390733.1 transcriptional regulator of fatty acids degradation [FadR-long-chain (C14-C20) acyl-CoAs] [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390733.1

    Status: PROVISIONAL

    Conserved Domains (2) summary
    pfam08359
    Location:58 → 190
    TetR_C_4; YsiA-like protein, C-terminal region
    pfam00440
    Location:11 → 57
    TetR_N; Bacterial regulatory proteins, tetR family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
3WHB_A.1
3WHB_B.1
3WHC_A.1
3WHC_B.1
3WHC_C.1
3WHC_D.1
3WHC_E.1
3WHC_F.1
P94548.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases