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opuD glycine betaine transporter [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937986, updated on 6-Oct-2023

Summary

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Gene symbol
opuD
Gene description
glycine betaine transporter
Locus tag
BSU_30070
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU30070
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Genomic context

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Sequence:
NC_000964.3 (3076818..3078356)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene lipid II flippase Neighboring gene putative NAD(FAD)-utilizing dehydrogenase Neighboring gene conserved sporulation-related protein Neighboring gene putative membrane enzyme for rhamnogalaturonan degradation

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
glycine betaine transporter
NP_390885.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 14996799, 15849754, 16850406, 8752321, 9925583; Product type t: transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390885.1 glycine betaine transporter [Bacillus subtilis subsp. subtilis str. 168]

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KXG1
    Conserved Domains (1) summary
    pfam02028
    Location:8 → 490
    BCCT; betaine/carnitine/choline family transporter
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54417.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases