U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

comEC DNA channel for uptake in competent cells [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937839, updated on 4-Apr-2024

Summary

Go to the top of the page Help
Gene symbol
comEC
Gene description
DNA channel for uptake in competent cells
Locus tag
BSU_25570
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU25570
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Sequence:
NC_000964.3 (2637543..2639873, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene hypothetical protein Neighboring gene dCMP deaminase associated to DNA transport (competence) Neighboring gene membrane bound high-affinity DNA-binding receptor

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Potential DNA binding and nuclease functions of ComEC domains characterized in silico. Baker JA, et al. Proteins, 2016 Oct. PMID 27318187, Free PMC Article
  2. Biogenesis of a putative channel protein, ComEC, required for DNA uptake: membrane topology, oligomerization and formation of disulphide bonds. Draskovic I, et al. Mol Microbiol, 2005 Feb. PMID 15661011, Free PMC Article
  3. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  4. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  5. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article

See all (6) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Potential DNA binding and nuclease functions of ComEC domains have been characterized in silico.
    Title: Potential DNA binding and nuclease functions of ComEC domains characterized in silico.
  2. characterization of the membrane topology of ComEC, a DNA uptake protein required for genetic competence
    Title: Biogenesis of a putative channel protein, ComEC, required for DNA uptake: membrane topology, oligomerization and formation of disulphide bonds.
Submit: New GeneRIF Correction

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
DNA channel for uptake in competent cells
NP_390435.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 12123453, 15661011, 16751195, 17630974, 21397556, 27318187; Product type cp : cell process

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2637543..2639873 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390435.1 DNA channel for uptake in competent cells [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390435.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1KS72
    Conserved Domains (1) summary
    TIGR00361
    Location:67 → 748
    ComEC_Rec2; DNA internalization-related competence protein ComEC/Rec2
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39695.2

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Other Literature Sources
Molecular Biology Databases