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sknR skin element; transcriptional repressor of yqaF-yqaN operon (Xre family) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937672, updated on 12-Feb-2021

Summary

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Gene symbol
sknR
Gene description
skin element; transcriptional repressor of yqaF-yqaN operon (Xre family)
Locus tag
BSU_26350
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU26350
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Genomic context

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Sequence:
NC_000964.3 (2698893..2699243)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein; skin element Neighboring gene putative transcriptional regulator; skin element Neighboring gene conserved phage protein of unknown function; skin element Neighboring gene putative kinase / phosphatase; skin element

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
skin element; transcriptional repressor of yqaF-yqaN operon (Xre family)
NP_390512.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 20889742; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390512.1 skin element; transcriptional repressor of yqaF-yqaN operon (Xre family) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390512.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P45902
    Conserved Domains (2) summary
    PRK13355
    Location:2 → 116
    PRK13355; bifunctional HTH-domain containing protein/aminotransferase; Provisional
    pfam01381
    Location:6 → 60
    HTH_3; Helix-turn-helix
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P45902.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases