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yrkP two-component response regulator [YrkQ] [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937663, updated on 12-Feb-2021

Summary

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Gene symbol
yrkP
Gene description
two-component response regulator [YrkQ]
Locus tag
BSU_26430
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU26430
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Genomic context

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Sequence:
NC_000964.3 (2704435..2705130, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene phosphate starvation inducible protein Neighboring gene two-component sensor histidine kinase [YrkP] Neighboring gene putative integral inner membrane protein Neighboring gene hypothetical protein Neighboring gene putative N-acetyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Identification of the sequences recognized by the Bacillus subtilis response regulator YrkP. Ogura M, et al. Biosci Biotechnol Biochem, 2008 Jan. PMID 18175906
  2. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  3. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  4. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  5. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. YrkP-binding regions are needed for the YrkP-mediated activation of other bacterial proteins.
    Title: Identification of the sequences recognized by the Bacillus subtilis response regulator YrkP.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
two-component response regulator [YrkQ]
NP_390520.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11717295, 18175906; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2704435..2705130 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390520.1 two-component response regulator [YrkQ] [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390520.1

    Status: PROVISIONAL

    UniProtKB/Swiss-Prot
    P54443
    Conserved Domains (1) summary
    COG0745
    Location:3 → 230
    OmpR; DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P54443.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases