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cidR transcriptional regulator (LysR family, cidAB expression) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937626, updated on 17-Dec-2024

Summary

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Gene symbol
cidR
Gene description
transcriptional regulator (LysR family, cidAB expression)
Locus tag
BSU_38310
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU38310
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Genomic context

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Sequence:
NC_000964.3 (3932198..3933103, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene lipoprotein binding ferrous or ferric iron for transport Neighboring gene ferrous ion permease Neighboring gene thiamine-phosphate pyrophosphorylase (thiamine phosphate synthase) Neighboring gene 5-(2-hydroxyethyl)-4-methylthiazole kinase Neighboring gene metabolic regulator of murein hydrolases Neighboring gene metabolic regulator controlling activity of murein hydrolases Neighboring gene putative sugar permease

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
transcriptional regulator (LysR family, cidAB expression)
NP_391710.1
  • Evidence 2a: Function from experimental evidences in other organisms; PubMedId: 23504016; Product type r : regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3932198..3933103 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391710.1 transcriptional regulator (LysR family, cidAB expression) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391710.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A5D4N674
    Conserved Domains (2) summary
    cd08438
    Location:92 → 287
    PBP2_CidR; The C-terminal substrate binding domain of LysR-like transcriptional regulator CidR, contains the type 2 periplasmic binding fold
    pfam00126
    Location:3 → 62
    HTH_1; Bacterial regulatory helix-turn-helix protein, lysR family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P39592.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases