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tpeJ two-component response regulator [TpeK(YxdK)] [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937599, updated on 6-Oct-2023

Summary

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Gene symbol
tpeJ
Gene description
two-component response regulator [TpeK(YxdK)]
Locus tag
BSU_39660
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU39660
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Genomic context

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Sequence:
NC_000964.3 (4072284..4072973, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene hypothetical protein Neighboring gene ABC transporter (permease); efflux of cationic peptides Neighboring gene ABC transporter (ATP-binding protein); efflux of cationic peptides Neighboring gene two-component sensor histidine kinase [YxdJ] Neighboring gene 2-deoxy-5-keto-D-gluconic acid 6-phosphate aldolase Neighboring gene inosose isomerase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
two-component response regulator [TpeK(YxdK)]
NP_391845.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 11717295, 15289557, 15870467, 21283517, 25875741; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    4072284..4072973 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391845.1 two-component response regulator [TpeK(YxdK)] [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391845.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G3W1
    Conserved Domains (1) summary
    COG0745
    Location:3 → 227
    OmpR; DNA-binding response regulator, OmpR family, contains REC and winged-helix (wHTH) domain [Signal transduction mechanisms, Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P42421.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases