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rsiV anti-sigma(V) factor [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937593, updated on 6-Oct-2023

Summary

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Gene symbol
rsiV
Gene description
anti-sigma(V) factor
Locus tag
BSU_27130
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU27130
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Genomic context

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Sequence:
NC_000964.3 (2770350..2771207)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative transcriptional regulator controlling amino acid export Neighboring gene RNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma(V)) Neighboring gene peptidoglycan O-acetyltransferase Neighboring gene hypothetical protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacterial sensing: A putative amphipathic helix in RsiV is the switch for activating σV in response to lysozyme. Lewerke LT, et al. PLoS Genet, 2018 Jul. PMID 30020925, Free PMC Article
  2. Evidence of a bacterial receptor for lysozyme: binding of lysozyme to the anti-σ factor RsiV controls activation of the ecf σ factor σV. Hastie JL, et al. PLoS Genet, 2014 Oct. PMID 25275625, Free PMC Article
  3. The activity of σV, an extracytoplasmic function σ factor of Bacillus subtilis, is controlled by regulated proteolysis of the anti-σ factor RsiV. Hastie JL, et al. J Bacteriol, 2013 Jul. PMID 23687273, Free PMC Article
  4. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  5. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. In Bacillus subtilis upon lysozyme binding to RsiV, the hydrophobic face of the amphipathic helix becomes accessible to a membrane-impermeable reagent. Thus, study proposes that amphipathic helices protect RsiV from cleavage in the absence of lysozyme.
    Title: Bacterial sensing: A putative amphipathic helix in RsiV is the switch for activating σV in response to lysozyme.
  2. RsiV directly binds to lysozyme.RsiV controls activation of the factor sigma V.
    Title: Evidence of a bacterial receptor for lysozyme: binding of lysozyme to the anti-σ factor RsiV controls activation of the ecf σ factor σV.
  3. Authors demonstrate that the activation of a member of the ECF30 subfamily of ECF sigma factors, sigma(V) in Bacillus subtilis, is controlled by the proteolytic destruction of the anti-sigma factor RsiV.
    Title: The activity of σV, an extracytoplasmic function σ factor of Bacillus subtilis, is controlled by regulated proteolysis of the anti-σ factor RsiV.
Submit: New GeneRIF Correction

General gene information

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Homology

General protein information

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Preferred Names
anti-sigma(V) factor
NP_390591.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16274938, 23687273, 26901131; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390591.1 anti-sigma(V) factor [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390591.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1JKF5
    Conserved Domains (3) summary
    pfam11738
    Location:189 → 270
    DUF3298; Protein of unknown function (DUF3298)
    pfam13739
    Location:86 → 164
    DUF4163; Domain of unknown function (DUF4163)
    pfam13786
    Location:34 → 93
    DUF4179; Domain of unknown function (DUF4179)
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O05403.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases