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sigV RNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma(V)) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937591, updated on 6-Oct-2023

Summary

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Gene symbol
sigV
Gene description
RNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma(V))
Locus tag
BSU_27120
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU27120
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Genomic context

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Sequence:
NC_000964.3 (2769850..2770350)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative amino acid exporter Neighboring gene putative transcriptional regulator controlling amino acid export Neighboring gene anti-sigma(V) factor Neighboring gene peptidoglycan O-acetyltransferase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Evidence of a bacterial receptor for lysozyme: binding of lysozyme to the anti-σ factor RsiV controls activation of the ecf σ factor σV. Hastie JL, et al. PLoS Genet, 2014 Oct. PMID 25275625, Free PMC Article
  2. Bacillus subtilis σ(V) confers lysozyme resistance by activation of two cell wall modification pathways, peptidoglycan O-acetylation and D-alanylation of teichoic acids. Guariglia-Oropeza V, et al. J Bacteriol, 2011 Nov. PMID 21926231, Free PMC Article
  3. The Bacillus subtilis extracytoplasmic function σ factor σ(V) is induced by lysozyme and provides resistance to lysozyme. Ho TD, et al. J Bacteriol, 2011 Nov. PMID 21856855, Free PMC Article
  4. The activity of σV, an extracytoplasmic function σ factor of Bacillus subtilis, is controlled by regulated proteolysis of the anti-σ factor RsiV. Hastie JL, et al. J Bacteriol, 2013 Jul. PMID 23687273, Free PMC Article
  5. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article

See all (8) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. RsiV controls activation of the factor sigma V.
    Title: Evidence of a bacterial receptor for lysozyme: binding of lysozyme to the anti-σ factor RsiV controls activation of the ecf σ factor σV.
  2. Authors demonstrate that the activation of a member of the ECF30 subfamily of ECF sigma factors, sigma(V) in Bacillus subtilis, is controlled by the proteolytic destruction of the anti-sigma factor RsiV.
    Title: The activity of σV, an extracytoplasmic function σ factor of Bacillus subtilis, is controlled by regulated proteolysis of the anti-σ factor RsiV.
  3. SigV activated two cell wall modification pathways, peptidoglycan O-acetylation and D-alanylation of teichoic acids.
    Title: Bacillus subtilis σ(V) confers lysozyme resistance by activation of two cell wall modification pathways, peptidoglycan O-acetylation and D-alanylation of teichoic acids.
  4. Lysozyme induces sigV expression.
    Title: The Bacillus subtilis extracytoplasmic function σ factor σ(V) is induced by lysozyme and provides resistance to lysozyme.
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General gene information

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Homology

General protein information

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Preferred Names
RNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma(V))
NP_390590.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 16274938, 21926231, 23687273, 26901131; Product type r: regulator

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390590.1 RNA polymerase ECF(extracytoplasmic function)-type sigma factor (sigma(V)) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390590.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1IUK3
    Conserved Domains (1) summary
    COG1595
    Location:15 → 164
    RpoE; DNA-directed RNA polymerase specialized sigma subunit, sigma24 family [Transcription]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O05404.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials