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tpeM ABC transporter (permease); efflux of cationic peptides [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937589, updated on 6-Jun-2024

Summary

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Gene symbol
tpeM
Gene description
ABC transporter (permease); efflux of cationic peptides
Locus tag
BSU_39630
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU39630
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Genomic context

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Sequence:
NC_000964.3 (4068550..4070418, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene desferrioxamine-and ferrichrome-binding transporter lipoprotein (shuttle system) Neighboring gene hypothetical protein Neighboring gene ABC transporter (ATP-binding protein); efflux of cationic peptides Neighboring gene two-component sensor histidine kinase [YxdJ] Neighboring gene two-component response regulator [TpeK(YxdK)] Neighboring gene 2-deoxy-5-keto-D-gluconic acid 6-phosphate aldolase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
ABC transporter (permease); efflux of cationic peptides
NP_391842.2
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 15289557, 15849754, 15870467, 16850406, 21078927, 28472044; Product type t : transporter

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    4068550..4070418 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391842.2 ABC transporter (permease); efflux of cationic peptides [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391842.2

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4G3V6
    Conserved Domains (1) summary
    pfam02687
    Location:85 → 156
    FtsX; FtsX-like permease family
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P42424.3

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases