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rarA DNA-dependent ATPase active at replication forks [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937545, updated on 6-Jun-2024

Summary

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Gene symbol
rarA
Gene description
DNA-dependent ATPase active at replication forks
Locus tag
BSU_27530
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU27530
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Genomic context

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Sequence:
NC_000964.3 (2812336..2813601)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene cysteine desulfurase involved in U34 tRNA thiolation Neighboring gene transcriptional regulator of cysteine biosynthesis Neighboring gene tRNA threonylcarbamoyladenosine dehydratase (t(6)A37 dehydratase) Neighboring gene miscRNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Bacillus subtilis RarA forms damage-inducible foci that scan the entire cell. Hernández-Tamayo R, et al. BMC Res Notes, 2019 Apr 11. PMID 30971308, Free PMC Article
  2. Single molecule tracking reveals functions for RarA at replication forks but also independently from replication during DNA repair in Bacillus subtilis. Romero H, et al. Sci Rep, 2019 Feb 13. PMID 30760776, Free PMC Article
  3. Bacillus subtilis RarA modulates replication restart. Carrasco B, et al. Nucleic Acids Res, 2018 Aug 21. PMID 29947798, Free PMC Article
  4. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  5. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Single molecule tracking reveals functions for RarA at replication forks but also independently from replication during DNA repair in Bacillus subtilis.
    Title: Single molecule tracking reveals functions for RarA at replication forks but also independently from replication during DNA repair in Bacillus subtilis.
  2. Data suggest that DNA-dependent ATPase active at replication forks (RarA) assembles at blocked forks to maintain genome integrity.
    Title: Bacillus subtilis RarA modulates replication restart.
  3. Bacillus subtilis RarA takes part in the DNA repair and forms damage-inducible foci that scan the entire cell.
    Title: Bacillus subtilis RarA forms damage-inducible foci that scan the entire cell.
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General gene information

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Homology

General protein information

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Preferred Names
DNA-dependent ATPase active at replication forks
NP_390631.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 15743409, 17641684, 21170359; Product type e: enzyme

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390631.1 DNA-dependent ATPase active at replication forks [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390631.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0A0D1IUS7
    Conserved Domains (1) summary
    PRK13342
    Location:3 → 421
    PRK13342; recombination factor protein RarA; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O34528.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials