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yrvJ putative N-acetylmuramoyl-L-alanine amidase, family 3 [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937544, updated on 10-Oct-2024
Gene symbol
yrvJ
Gene description
putative N-acetylmuramoyl-L-alanine amidase, family 3
Locus tag
BSU_27580
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU27580
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Sequence:
NC_000964.3 (2818494..2820050)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene miscRNA Neighboring gene hypothetical protein Neighboring gene gly-tRNA(Ala) deacylase / D-Tyr-tRNATyr deacylase Neighboring gene GTP pyrophosphokinase (RelA/SpoT)

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
putative N-acetylmuramoyl-L-alanine amidase, family 3
NP_390636.1
  • Evidence 3: Putative function from multiple computational evidences; Product type e: enzyme

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390636.1 putative N-acetylmuramoyl-L-alanine amidase, family 3 [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390636.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAP1DXZ1
    Conserved Domains (3) summary
    smart00287
    Location:261 → 319
    SH3b; Bacterial SH3 domain homologues
    COG0860
    Location:331 → 518
    AmiC; N-acetylmuramoyl-L-alanine amidase [Cell wall/membrane/envelope biogenesis]
    COG3103
    Location:1 → 248
    YgiM; Uncharacterized conserved protein YgiM, contains N-terminal SH3 domain, DUF1202 family [General function prediction only]
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
O32041.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases
Research Materials