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sigY RNA polymerase ECF (extracytoplasmic function)-type sigma factor (sigma-Y) [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937400, updated on 17-Dec-2024
Gene symbol
sigY
Gene description
RNA polymerase ECF (extracytoplasmic function)-type sigma factor (sigma-Y)
Locus tag
BSU_38700
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU38700
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Sequence:
NC_000964.3 (3970312..3970848, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene putative ABC-transporter (permease) Neighboring gene putative ABC transporter component (ATP-binding protein) Neighboring gene negative regulator of sigma-Y activity Neighboring gene putative sigma-Y antisigma factor component Neighboring gene sigma-Y antisigma factor Neighboring gene putative purine-cytosine (pyridoxine) permease Neighboring gene NAD(P)H dehydratase

Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Related articles in PubMed

  1. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  2. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746
  3. From a consortium sequence to a unified sequence: the Bacillus subtilis 168 reference genome a decade later. Barbe V, et al. Microbiology (Reading), 2009 Jun. PMID 19383706, Free PMC Article
  4. The complete genome sequence of the gram-positive bacterium Bacillus subtilis. Kunst F, et al. Nature, 1997 Nov 20. PMID 9384377

GeneRIFs: Gene References Into Functions

Homology

Preferred Names
RNA polymerase ECF (extracytoplasmic function)-type sigma factor (sigma-Y)
NP_391749.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 12897008, 14769884, 14993308; Product type r: regulator

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    3970312..3970848 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_391749.1 RNA polymerase ECF (extracytoplasmic function)-type sigma factor (sigma-Y) [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_391749.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    A0AAX3RM27
    Conserved Domains (1) summary
    PRK09638
    Location:2 → 177
    PRK09638; RNA polymerase sigma factor SigY; Reviewed
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P94370.1

Gene LinkOut

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Other Literature Sources
Molecular Biology Databases