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phoR two-component sensor histidine kinase [ Bacillus subtilis subsp. subtilis str. 168 ]

Gene ID: 937387, updated on 4-Feb-2024

Summary

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Gene symbol
phoR
Gene description
two-component sensor histidine kinase
Locus tag
BSU_29100
Gene type
protein coding
RefSeq status
PROVISIONAL
Organism
Bacillus subtilis subsp. subtilis str. 168 (strain: 168, sub-species: subtilis, type-material: type strain of Bacillus subtilis)
Lineage
Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus
Old locus tag
BSU29100
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Genomic context

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Sequence:
NC_000964.3 (2976068..2977807, complement)

NC_000964.3Genomic Context describing neighboring genes Neighboring gene formamidopyrimidine-DNA glycosylase; 5-hydroxymethyl-uracil DNA-glycosylase Neighboring gene DNA polymerase I Neighboring gene two-component response regulator Neighboring gene malate dehydrogenase (NAD-dependent) Neighboring gene isocitrate dehydrogenase

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_000964.3

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. PhoR autokinase activity is controlled by an intermediate in wall teichoic acid metabolism that is sensed by the intracellular PAS domain during the PhoPR-mediated phosphate limitation response of Bacillus subtilis. Botella E, et al. Mol Microbiol, 2014 Dec. PMID 25315493
  2. CcpA causes repression of the phoPR promoter through a novel transcription start site, P(A6). Puri-Taneja A, et al. J Bacteriol, 2006 Feb. PMID 16452408, Free PMC Article
  3. Peptidoglycan metabolism is controlled by the WalRK (YycFG) and PhoPR two-component systems in phosphate-limited Bacillus subtilis cells. Bisicchia P, et al. Mol Microbiol, 2010 Feb. PMID 20487291
  4. Bacillus subtilis, the model Gram-positive bacterium: 20 years of annotation refinement. Borriss R, et al. Microb Biotechnol, 2018 Jan. PMID 29280348, Free PMC Article
  5. An updated metabolic view of the Bacillus subtilis 168 genome. Belda E, et al. Microbiology (Reading), 2013 Apr. PMID 23429746

See all (7) citations in PubMed

GeneRIFs: Gene References Into Functions

What's a GeneRIF?
  1. Results show that PhoR kinase monitors wall teichoic acid synthesis through the intracellular PAS domain.
    Title: PhoR autokinase activity is controlled by an intermediate in wall teichoic acid metabolism that is sensed by the intracellular PAS domain during the PhoPR-mediated phosphate limitation response of Bacillus subtilis.
  2. Study concludes that peptidoglycan metabolism is controlled by both WalRK and PhoPR in phosphate-limited B. subtilis cells.
    Title: Peptidoglycan metabolism is controlled by the WalRK (YycFG) and PhoPR two-component systems in phosphate-limited Bacillus subtilis cells.
  3. direct repression by CcpA of a newly discovered Esigma(A)-responsive phoPR promoter
    Title: CcpA causes repression of the phoPR promoter through a novel transcription start site, P(A6).
Submit: New GeneRIF Correction

Pathways from PubChem

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General gene information

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Homology

General protein information

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Preferred Names
two-component sensor histidine kinase
NP_390788.1
  • Evidence 1a: Function from experimental evidences in the studied strain; PubMedId: 10433720, 12486063, 14762014, 15205429, 16430694, 16452408, 17085571, 20487291, 23145827, 25315493, 25355628; Product type rc : receptor

NCBI Reference Sequences (RefSeq)

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Genome Annotation

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference assembly

Genomic

  1. NC_000964.3 Reference assembly

    Range
    2976068..2977807 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. NP_390788.1 two-component sensor histidine kinase [Bacillus subtilis subsp. subtilis str. 168]

    See identical proteins and their annotated locations for NP_390788.1

    Status: PROVISIONAL

    UniProtKB/TrEMBL
    D4FZY7
    Conserved Domains (2) summary
    TIGR02966
    Location:234 → 571
    phoR_proteo; phosphate regulon sensor kinase PhoR
    pfam16736
    Location:35 → 140
    sCache_like; Single Cache-like
Nucleotide Protein
Heading Accession and Version
Protein Accession Links
GenPept Link UniProtKB Link
P23545.1

Gene LinkOut

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Other Literature Sources
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Research Materials